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Journal: PLOS Pathogens
Article Title: Resistance breaking Root-knot nematodes carry a fitness cost associated with defective feeding site development
doi: 10.1371/journal.ppat.1014581
Figure Lengend Snippet: Principal component analysis (PCA) of mRNA-seq data shows clear separation between uninfected (control) cucumber roots and roots infected with M. javanica VW4 or VW5 at both 7 (A) and 28 dpi (B) . The x- and y-axes show Principal component 1 and Principal component 2, which explains 20.97% and 15.2% of the total variance, respectively. Each data point represents an independent biological replicate of RNA extracted from galled tissue of cucumber roots infected with VW4 or VW5, or from uninoculated control roots. Black data points indicate uninoculated control roots, red indicates VW4-infected roots, and green indicates VW5-infected roots.
Article Snippet: Samples were checked for quality and ran on a NovaSeq X Plus 25B instrument (Novogene) and complied into a mRNA library preparation (poly A enrichment) using the
Techniques: Control, Infection